BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B01SP1|AL426634
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1652 1524 0.0
>3x_Contig1652
Length = 14842
Score = 1524 bits (769), Expect = 0.0
Identities = 769/769 (100%)
Strand = Plus / Minus
Query: 1 gatcctttgtccaagatttgtctcaaaattcttgttgattgaccggcatcgtgtgaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2663 gatcctttgtccaagatttgtctcaaaattcttgttgattgaccggcatcgtgtgaggcc 2604
Query: 61 atgatatcactaacgatactgattccatccacggacctcttcccgttcaaagcctgagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603 atgatatcactaacgatactgattccatccacggacctcttcccgttcaaagcctgagct 2544
Query: 121 tggaaaaggactctaccgatgttgtctggatgtaatccaccaatggcaacagttctaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543 tggaaaaggactctaccgatgttgtctggatgtaatccaccaatggcaacagttctaatc 2484
Query: 181 caatcgcattttttctcctcaagacgtgtcaagattcgagaaacaccttcaggacccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2483 caatcgcattttttctcctcaagacgtgtcaagattcgagaaacaccttcaggacccatt 2424
Query: 241 ggaatcttcttaatatcctttttagtctgagtttcgaaaactgttccaacaccaatgtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2423 ggaatcttcttaatatcctttttagtctgagtttcgaaaactgttccaacaccaatgtag 2364
Query: 301 tcaatcatatcaggaccccattccgccaacctatcaacttcttcgactttaccgactgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2363 tcaatcatatcaggaccccattccgccaacctatcaacttcttcgactttaccgactgac 2304
Query: 361 catccaacgatcttatcaggaccgactaattttctaaccattgggattggaatatcctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2303 catccaacgatcttatcaggaccgactaattttctaaccattgggattggaatatcctct 2244
Query: 421 tgtcccacatgaatcccagaagcgtcaatagctaatgcaacatcaactctatcgttgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2243 tgtcccacatgaatcccagaagcgtcaatagctaatgcaacatcaactctatcgttgata 2184
Query: 481 atcaagggaacattgaaagaatcacatatctttttcactgctaatgcttcagcaacaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2183 atcaagggaacattgaaagaatcacatatctttttcactgctaatgcttcagcaacaaac 2124
Query: 541 gtctttgcatcagtatccttctcccttaattggaccatagtaactccattcttcaaccct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2123 gtctttgcatcagtatccttctcccttaattggaccatagtaactccattcttcaaccct 2064
Query: 601 tgttcgacctgaaacaataacgtcttgccctcgggcaacatagtcgaatctgtcaccaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2063 tgttcgacctgaaacaataacgtcttgccctcgggcaacatagtcgaatctgtcaccaaa 2004
Query: 661 tacaaggtgtaatcaacgctttccttattaaccattattgacagatttttctgaccttag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2003 tacaaggtgtaatcaacgctttccttattaaccattattgacagatttttctgaccttag 1944
Query: 721 tgatcttaccgattgatactcaaatacgtacctttaattcacccggaaa 769
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1943 tgatcttaccgattgatactcaaatacgtacctttaattcacccggaaa 1895
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5259
Number of Sequences: 1807
Number of extensions: 5259
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)